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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800321.1_cds_XP_016469254.1_6142
CDS Infomation

[gene=LOC107791669] [db_xref=GeneID:107791669] [protein=protein NRT1/ PTR FAMILY 1.2-like] [partial=5'] [protein_id=XP_016469254.1] [location=complement(join(35117..36557,37434..37692,37791..37920,38231..>38317))] [gbkey=CDS]
Sequence

TCTGCCATATTTGGTCTCGATCGCTACTGGCCTCGATCTCGACAGGCACCTCGATTCTCG
AACTCGATACCTTGTCTTCGTGCTCTGTTAAATGGAGCAGGATTTGACAGAGCTGCTTTC
TTTAGATCAGGAGAAGCAAACTTCTTCTCATTCATCTTCATGATTCCAATTAAAAGTAGA
CCAAAGGGTGGCCACGTTACCATGCCTTTTATTATAGCAAACGAGGCATTGGAGAAAGTG
GCAAGCTATGGGCTTTTACCAAATATGACATTCTATTTGATGAATGATTATAGGATGGAG
GTTACTACTGCTCAAAATTTACTGTTTTTCTGGTCAGCAGCTACAAATTTCTTGCCTTTA
GTTGGTGCTTTTGTTGCTGATTCATATCTGGGTCGTTTCCTTGCCATTGGCCTTGGTTCC
ATCTTCAGTTTCCTGGTAATTTACATTTCGGTCTTGAACGTGAACTTATATTATAAGCTG
CATTTGCCTCCGCTTATGCTTGCACTCTTTGTTGCAGGCGATCAATTAGGGCAGGCTTGT
AAATCTGCAACAGCTTCGCAATACATGCTCTTGGTCTTTTCATTTCTGCTCATGTCAATT
GGTGCTGGTGGTATAAGACCATGTTCTTTAGCCTTTGGTGCTAACCAGTTTGACAAGAGA
GATAATCCCAACAACCAAAGGGTGTTAGAAAGCTTCTTTGCCTGGTATTATGCTTCATAC
ATAGTCTTTGTTCTGATTGCACGGACAGGTATCGTTTACCTTCAAGATAAGATGGGCTGG
AAAATAGGTTTTGGAGTTCCTGCAATTCTCATGTTCTTATCCGCGCACTTTTTCTTCCTT
GCTTCTCCGTTTTATATCAAGGAAAAGGTTCGCTCAAACTTGTTTGGCAGCTTTATTCAA
GTAATGGTGGTTGCCTACAAGAATAGGAAACTCCCATACCCTACTCAGAATTCTGATTAC
CATCACAAGAATGGTTCAGAACTTCAAGTGCCAACGGAGAAACTGAGATTCTTAAACAAA
GCTTGCATTATTAACAGCCCTGAAGATGTTAAGCCAAATGGAGTTTCAGTCAATTCATGG
AACCTTTGTACAGTGGAGCAAGTTGAGGAGCTAAAAGCCCTCATTAGGATCATGCCATTG
TGGTCGACGGGGATCATGATATCAATAAACTTGAGCCAAGTGTCATTCCCTTTGCTACAA
GCTCAATCCATGGATAGACATCTAACGAAAAAATTTCAAATTCCAGCTGGCTCATTTGGT
ATTTTTCTTATGATCGCATTAACACTTTGGGTTTTTCTCTATGACCGTGTGATCCTTCCA
TTGGCATCGAAAATCAGAGGAAGAGCAGTTCGTCTAACACCTATAGTCAGAATGGGGATT
GGTATATTCGTCTCTTGCATGTCTATGTTAGTCTCTGGTATCGTGGAACATGTTCGACGA
AGAAGAGCAATAAGCCAAGGGCTCTTGAACAACCCCGAGGGGTTGGTGGAAATGTCAGCT
ATGTGGCTCATACTGCAAAATAGTTTAAATGGAATAGCAGAGGCATTCAGTGCAATCGGC
CAGACAGAGTTCTATTATTCTGAGCTCCCGAGTAGTATGTCAAGTCTCGCATCTGCACTC
TTAGGACTAGGAATGGCAGTGGCAAATCTATTAGCAATTGTTATCCTGAGTGCTGTGGAT
AAGTATACCAAAGGAGATGGGAAAGAGAGTTGGGTTTCAAGCAGTATCAACAAGGGTCAC
TATGAATATTACTACTGGCTTCTTGCTATTATGACATCTTTTAATCTGCTTTATTTTATG
ATTTGTAGCTGGGCATATGGACCTTGTGCTAACATTGACATCACTAAGAGAATGTTAGAG
GTTAGTGATGATGATGATCTGCCACAGGAGAACGTACCTATTCTACAAGGAAAATGA

Peptide Sequence

PEP ID

XP_016469254.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 1.2-like, partial [Nicotiana tabacum]
Sequence

SAIFGLDRYWPRSRQAPRFSNSIPCLRALLNGAGFDRAAFFRSGEANFFSFIFMIPIKSR
PKGGHVTMPFIIANEALEKVASYGLLPNMTFYLMNDYRMEVTTAQNLLFFWSAATNFLPL
VGAFVADSYLGRFLAIGLGSIFSFLVIYISVLNVNLYYKLHLPPLMLALFVAGDQLGQAC
KSATASQYMLLVFSFLLMSIGAGGIRPCSLAFGANQFDKRDNPNNQRVLESFFAWYYASY
IVFVLIARTGIVYLQDKMGWKIGFGVPAILMFLSAHFFFLASPFYIKEKVRSNLFGSFIQ
VMVVAYKNRKLPYPTQNSDYHHKNGSELQVPTEKLRFLNKACIINSPEDVKPNGVSVNSW
NLCTVEQVEELKALIRIMPLWSTGIMISINLSQVSFPLLQAQSMDRHLTKKFQIPAGSFG
IFLMIALTLWVFLYDRVILPLASKIRGRAVRLTPIVRMGIGIFVSCMSMLVSGIVEHVRR
RRAISQGLLNNPEGLVEMSAMWLILQNSLNGIAEAFSAIGQTEFYYSELPSSMSSLASAL
LGLGMAVANLLAIVILSAVDKYTKGDGKESWVSSSINKGHYEYYYWLLAIMTSFNLLYFM
ICSWAYGPCANIDITKRMLEVSDDDDLPQENVPILQGK

Transcript Sequence

Gene sequence data has not been registered.